XP-Practice: ANGLET workshop (25 to 29 June 2018)

Advanced OMIC Profiling and Integration

Welcome to the first summer school organized in Anglet.

Practical Information

here

• Importation data set here
  • Excel, txt, …
• Manipulation data set here
• Visualisation data
  • plot, scatter-plot, boxplot
• Basic Stat
  • Correlation, summary stat, mediane, moyenne, variance, …
• Basic Probability
  • pdf, histogram, density estimation, smooth estimation
  • Parametric estimation density here

16 November 2017

• Revision of previous session (1h30/2h)

  • Analysis of a data set on a survey about behaviour diet of elderly
  • Analysis of this data set could be found at Correction_report_nutrition.md
  • Download the file Analysis.zip
  • Reproduce the same result as in Correction_report_nutrition.md
  • Try to do the same analyis on your own data set
  • If you don’t have any one: choose this one intima-media

• Linear model: univariate and multivariate (1h/1h30)

  • Some slides here
  • If you want to reproduce analysis from slides you need this data file fishHG.txt
  • Polynomial Model: some R code here

23 November 2017

• Time series analysis: short introduction
  • Some slides here
  • A simple introduction here
  • Mutiple Time Series here
  • Short example on Arima model here
  • Forecasting here
  • Exercise: case study here
• Extreme Value : short introduction
  • case study here
    
  • A nice R package exTremes here